Single cell genomics — citation graph of key research

Explore the most influential research on single cell genomics as an interactive citation graph on Constellation. The papers below are connected by direct citations and shared references — open any one to center the graph on it and discover related work.

Top papers on single cell genomics

  1. Benchmarking atlas-level data integration in single-cell genomics
    Malte D. Luecken, Maren Büttner, Kridsadakorn Chaichoompu et al. — 2021 · Nature Methods · 1,458 citations
  2. Defining cell types and states with single-cell genomics
    Cole Trapnell — 2015 · Genome Research · 896 citations
  3. Scaling single-cell genomics from phenomenology to mechanism
    Amos Tanay, Aviv Regev — 2017 · Nature · 886 citations
  4. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
    Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. — 2012 · Journal of Computational Biology · 27,434 citations
  5. Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
    Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis et al. — 2018 · Genome biology · 1,151 citations
  6. Revealing the vectors of cellular identity with single-cell genomics
    Allon Wagner, Aviv Regev, Nir Yosef — 2016 · Nature Biotechnology · 722 citations
  7. Single-cell genomics identifies cell type–specific molecular changes in autism
    Dmitry Velmeshev, Lucas Schirmer, Diane Jung et al. — 2019 · Science · 1,024 citations
  8. scMC learns biological variation through the alignment of multiple single-cell genomics datasets
    Lihua Zhang, Qing Nie — 2021 · Genome biology · 867 citations
  9. Integrated analysis of multimodal single-cell data
    Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen et al. — 2021 · Cell · 16,272 citations
  10. Single-Cell Genomics Unveils Critical Regulators of Th17 Cell Pathogenicity
    Jellert T. Gaublomme, Nir Yosef, Youjin Lee et al. — 2015 · Cell · 614 citations
  11. Organoid single-cell genomic atlas uncovers human-specific features of brain development
    Sabina Kanton, Michael James Boyle, Zhisong He et al. — 2019 · Nature · 838 citations
  12. Single Cell Genomics: Advances and Future Perspectives
    Iain C. Macaulay, Thierry Voet — 2014 · PLoS Genetics · 422 citations