Protein structure prediction and analysis using the Robetta server
David E. Kim, Dylan Chivian, David Baker
2004 · Nucleic Acids Research · 2,163 citations
The Robetta server (http://robetta.bakerlab.org) provides automated tools for protein structure prediction and analysis. For structure prediction, sequences submitted to the server are parsed into putative domains and structural models are generated using either comparative modeling or de novo structure prediction methods. If a confident match to a protein of known structure is found using BLAST, PSI-BLAST, FFAS03 or 3D-Jury, it is used as a template for comparative modeling. If no match is found, structure predictions are made using the de novo Rosetta fragment insertion method. Experimental…
Explore this paper's citation graph on Constellation.